dynamo.pl.streamline_clusters¶
- dynamo.pl.streamline_clusters(adata, basis='umap', clusters='clusters', color_key_cmap='Spectral', *args, **kwargs)[source]¶
Scatter plot for visualizing streamline clusters in selected basis.
- Parameters:
adata (
AnnData) – an Annodata object.basis (
str(default:'umap')) – the reduced dimension stored in adata.uns. The specific basis key will be constructed as “streamline_clusters_”+basis. Defaults to “umap”.clusters (default:
'clusters') – the key of cluster data stored in the basis data. Defaults to “clusters”.color_key_cmap (
str(default:'Spectral')) – name of the pyplot color map used for plotting. Defaults to “Spectral”.*args – not used. Left here for backward compatibility.
**kwargs – not used. Left here for backward compatibility.
- Return type: