dynamo.pl.circosPlot

dynamo.pl.circosPlot(network, node_label_key=None, circos_label_layout='rotate', node_color_key=None, show_colorbar=True, edge_lw_scale=0.5, edge_alpha_scale=0.5)[source]

wrapper for drawing circos plot via nxviz >= 0.7.3

Parameters:

  • network (Graph) – a network graph instance

  • node_label_key (Optional[str] (default: None)) – node label (attribute) in network for grouping nodes, by default None

  • circos_label_layout (str (default: 'rotate')) – layout of circos plot (see nxviz docs for details), by default “rotate”

  • node_color_key (Optional[str] (default: None)) – node attribute in network, corresponding to color values of nodes, by default None

  • show_colorbar (bool (default: True)) – whether to show colorbar, by default True

  • edge_lw_scale (float (default: 0.5)) – the line width scale of edges drawn in plot

  • edge_alpha_scale (float (default: 0.5)) – the alpha (opacity, transparency) scale of edges, the value should be in [0, 1.0]

Return type:

Axes

Returns:

the Matplotlib Axes on which the Circos plot is drawn.